Protein ZmLBD19
ZmLBD19 is a protein in the LBD family.
Information
TF Name: ZmLBD19
Species: Maize
TF Family: LBD
Gene Name(Synonym): IG1
Uniprot ID: A0A1D6PDQ1
Subgenome: 1

Protein ZmLBD19

ZmLBD19 is a protein in the LBD family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF03195
Zm00001eb145150_T005
Zm00001eb145150_T001
Zm00001eb145150_T002
Zm00001eb145150_T003
Zm00001eb145150_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d042560DAPseq no logo sequence fimo position
Zm00001d042560DAPseq no logo sequence fimo position
Zm00001d042560ChIPseq no logo sequence fimo position
Zm00001d042560PChIPseq no logo sequence fimo position

Interactions where ZmLBD19 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmLBD19 is the target  
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There are 78 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb145150_T005 from maize genome v5

Amino Acid Sequence
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MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGQ

MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGQ

MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGQ

MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGQ

MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGQ

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF03195
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Nucleotide Sequence
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CCCTGATTTGAGGCAGTATTCCTCA...

GRMZM2G118250_T01 from maize genome v3

Amino Acid Sequence
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MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQVM

Nucleotide Sequence
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ACCCAACCCTGCCTTCTCTTCTTCC...

GRMZM2G118250_T02 from maize genome v3

Amino Acid Sequence
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MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQVM

Nucleotide Sequence
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CCCTGATTTGAGGCAGTATTCCTCA...

GRMZM2G118250_T03 from maize genome v3

Amino Acid Sequence
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MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGQ

Nucleotide Sequence
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ACCCAACCCTGCCTTCTCTTCTTCC...

GRMZM2G118250_T04 from maize genome v3


Related TFome: pUT6740

Amino Acid Sequence
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MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGQ

Nucleotide Sequence
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CAACCCTGCCTTCTCTTCTTCCTTA...

GRMZM2G118250_T05 from maize genome v3

Amino Acid Sequence
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MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGQ

Nucleotide Sequence
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CCCTGATTTGAGGCAGTATTCCTCA...

GRMZM2G118250_T06 from maize genome v3

Amino Acid Sequence
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MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGQ

Nucleotide Sequence
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AGCTTGCGCGGTCTCACTCTCTCTC...

Zm00001d042560_T001 from maize genome v4

Amino Acid Sequence
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MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGY

Nucleotide Sequence
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CTTCTTCCTTATTCCCAGTTTCCCA...

Zm00001d042560_T002 from maize genome v4

Amino Acid Sequence
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MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGQ

Nucleotide Sequence
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CAACCCTGCCTTCTCTTCTTCCTTA...

Zm00001eb145150_T001 from maize genome v5

Amino Acid Sequence
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MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGQ

Nucleotide Sequence
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TCTACGAGGACCCAACCCTGCCTTC...

Zm00001eb145150_T002 from maize genome v5

Amino Acid Sequence
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MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGY

Nucleotide Sequence
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TCTACGAGGACCCAACCCTGCCTTC...

Zm00001eb145150_T003 from maize genome v5

Amino Acid Sequence
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MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGQ

Nucleotide Sequence
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CTACGAGGACCCAACCCTGCCTTCT...

Zm00001eb145150_T004 from maize genome v5

Amino Acid Sequence
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MASSVPAPSGSVITVASSSSSAAAAAVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNE
LHPFQREDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPTGPQAMAEFIGN
AMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDGGEPIARLGINGGGYEFGYSTAMGGSGAVSGLGTLG
ISPFLKSGTAGGDEKPNGGY

Nucleotide Sequence
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GCCTTCTCTTCTTCCTTATTCCCAG...

Zm00001eb145160_T001 from maize genome v5

Amino Acid Sequence
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MGVDGSIRLLTAVGLLVAAGGTRLQERADAERPEAGDSARPAHRGRVAELVAAAVDPQPRDGLAAVIAPGQHLRVAELLL
PEHGGGASEGPERRRVSNVDEVVRAVRHRVADELCHRLRPCRRRGRRSCRCRLQGRRARTN

Nucleotide Sequence
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AAAACCAAAACAAACCAAACCTGAC...


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